Protein sequence databases and sequence annotation in UniProtKB

28 April 2023

Organizer: SIB training group, SIB Swiss Institute of Bioinformatics

- SIB Training page: about this course

- Video: 'Inside expert biocuration in UniProtKB/Swiss-Prot'

- Link to the exam page: https://education.expasy.org/cours/SIB_Protein_2023_exa/

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PART 1 (morning)

Protein sequence databases and sequence annotation in UniProtKB: theory and practicals

Course material (theory and practicals): link to the pdf

Speakers: Marie-Claude.Blatter(at)sib.swiss & Elisabeth.Gasteiger(at)sib.swiss

Google doc
Protein sequences and annotation: overview
Nucleic acid sequence databases 
- INSDC, Ensembl, RefSeq
UniProtKB
- UniProtKB/Swiss-Prot
- UniProtKB/TrEMBL
- Biochemical data (Rhea & ChEBI)
- Gene Ontology
- UniProt web sites and tools
NCBI Protein sequence databases
- RefSeq

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PART 2 (afternoon)

Proteomes and Automated annotation in UniProtKB: theory and practicals

Speaker: Ivo.Predruzzi(at)sib.swiss

Course material (theory):

Course material (practicals):

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